BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A06SP1|AL427240
(1013 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1042 1963 0.0
>3x_Contig1042
Length = 3616
Score = 1963 bits (989), Expect = 0.0
Identities = 1005/1011 (99%)
Strand = Plus / Plus
Query: 1 gatctcgaggtcgtaatcgtttcaataagcttctatcgataataatataggttaagttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gatctcgaggtcgtaatcgtttcaataagcttctatcgataataatataggttaagttct 332
Query: 61 cacagcaaggtaatataacacctagtgggtgtttgcattcattaaaacctatgtggaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cacagcaaggtaatataacacctagtgggtgtttgcattcattaaaacctatgtggaaaa 392
Query: 121 ttgaaaagcagcccgcacatctacaaagcagtattggaacatggaaaagtgattcgaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ttgaaaagcagcccgcacatctacaaagcagtattggaacatggaaaagtgattcgaaat 452
Query: 181 atcaaacaaagaaaccattaacaactggtattctccactggcaagtctgttgataattcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atcaaacaaagaaaccattaacaactggtattctccactggcaagtctgttgataattcc 512
Query: 241 aaacattcacgtgacttgtgtacttctccttccctttttttttttgcagattttccgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aaacattcacgtgacttgtgtacttctccttccctttttttttttgcagattttccgctg 572
Query: 301 gaatttcaacggtccaaatgataggtgaaagacatctgatgccaatatctgcgatgagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gaatttcaacggtccaaatgataggtgaaagacatctgatgccaatatctgcgatgagaa 632
Query: 361 agggaccagattcctgtgctactgactcttttttttttgagctgtgccagttgattgccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 agggaccagattcctgtgctactgactcttttttttttgagctgtgccagttgattgccc 692
Query: 421 atcggacagcttcatataaagagagttttttcaactgtttcaagcgtttatctagcttcc 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 693 atcggacagcttcatataaagagagtcttttcaactgtttcaagcgtttatctagcttcc 752
Query: 481 agctctgtcttgtattgttctattcagtacttttctttagtgcccaaatatacgagctca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 agctctgtcttgtattgttctattcagtacttttctttagtgcccaaatatacgagctca 812
Query: 541 cgcaggtgaatcgacgatgtcaagtaataagccggctgtagatccattccattccttcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 cgcaggtgaatcgacgatgtcaagtaataagccggctgtagatccattccattccttcct 872
Query: 601 agcaggatcaatcgcaggtgctatagaagcctccatcacttatcctttcgagtttgccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 agcaggatcaatcgcaggtgctatagaagcctccatcacttatcctttcgagtttgccaa 932
Query: 661 aacgaggttacagttggtggataaggctagtaaagcttccagaaatccattggttctaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 aacgaggttacagttggtggataaggctagtaaagcttccagaaatccattggttctaat 992
Query: 721 atacaatacgggtaagaactacggtatttcatccatttacgtcggttgtccagctttcat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 atacaatacgggtaagaactacggtatttcatccatttacgtcggttgtccagctttcat 1052
Query: 781 cgttggtaacacagcaaaggccggtattagatttcttgggttcgacacaatcaagaactt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 cgttggtaacacagcaaaggccggtattagatttcttgggttcgacacaatcaagaactt 1112
Query: 841 gcttcgagacaagaagaccggtgagttgagtggatttagaggtgttgttgccgggttagg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 gcttcgagacaagaagaccggtgagttgagtggatttagaggtgttgttgccgggttagg 1172
Query: 901 tgcaggtttkttggaatcggtcgtggctgttactccattcgaagccatcaagactgcatt 960
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1173 tgcaggtttgttggaatcggtcgtggctgtgactccattcgaagccatcaagactgcatt 1232
Query: 961 gatcgatgataagcaagccgctgtgcccaaatatcaaaataacggggaagg 1011
|||||||||||||||||| |||||||| |||||||||||||||||| ||||
Sbjct: 1233 gatcgatgataagcaagctgctgtgccaaaatatcaaaataacgggaaagg 1283
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,504
Number of Sequences: 1807
Number of extensions: 13504
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 1013
length of database: 10,358,551
effective HSP length: 16
effective length of query: 997
effective length of database: 10,329,639
effective search space: 10298650083
effective search space used: 10298650083
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)